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  1. In this section we describe the SSSOM standard in four subsections: The core data model and the metadata elements included in SSSOM How SSSOM is exchanged, including the canonical simple tabular serialization Governance and sustainability of the standard The emerging software ecosystem for working with SSSOM mappings
  2. SSSOM is a Simple Standard for Sharing Ontological Mappings, providing. a TSV-based representation for ontology term mappings; a comprehensive set of standard metadata elements to describe mappings and; a standard translation between the TSV and the Web Ontology Language (OWL).
  3. escholarship.org

    We have developed the Simple Standard for Sharing Ontological Mappings (SSSOM) which addresses these problems by: (i) Introducing a machine-readable and extensible vocabulary to describe metadata that makes imprecision, inaccuracy and incompleteness in mappings explicit.
  4. berkeleybop.github.io

    Implementing open and community-driven collaborative workflows designed to evolve the standard continuously to address changing requirements and mapping practices. Providing reference tools and software libraries for working with the standard. Publication: Matentzoglu, N., et al. (2022). A Simple Standard for Sharing Ontological Mappings (SSSOM).
  5. mapping-commons.github.io

    A Simple Standard for Ontological Mappings 2024: A quick guide for getting started with publishing better entity mappings (RDA's 23rd plenary) November 13 th, 2024, hybrid; ... Synergizing Simple Standard for Sharing Ontology Mappings (SSSOM) and the Observational Health Data Sciences and Informatics (OHDSI) 3rd July 2023, https://www.ohdsi ...
  6. tagteam.harvard.edu

    (iv) Providing reference tools and software libraries for working with the standard. In this paper, we present the SSSOM standard, describe several use cases in detail and survey some of the existing work on standardizing the exchange of mappings, with the goal of making mappings Findable, Accessible, Interoperable and Reusable (FAIR).
  7. monarch-initiative.github.io

    A Simple Standard for Sharing Ontological Mappings (SSSOM) SSSOM is a Simple Standard for Sharing Ontological Mappings, providing . a TSV-based representation for ontology term mappings; a comprehensive set of standard metadata elements to describe mappings and ; a standard translation between the TSV and the Web Ontology Language (OWL).
  8. mapping-commons.github.io

    A Simple Standard for Sharing Ontology Mappings (SSSOM) Oboacademy2022 Initializing search GitHub A Simple Standard for Sharing Ontology Mappings (SSSOM) ... How to gradually enrich OMOP mappings with SSSOM Reference Reference Glossary Related documentation Funding Table of contents OBO Academy 2022: Introduction to manual mapping curation ...
  9. Simple Standard for Sharing Ontology Mappings. Contribute to mapping-commons/sssom development by creating an account on GitHub. ... In 2020, we introduced the Simple Standard for Sharing Ontology Mappings (SSSOM) as a way for the mapping community to exchange and consolidate mappings using a simple TSV format. SSSOM seeks to solve, in ...

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