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Showing results excluding:
  • www.researchgate.net

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  1. academic.oup.com

    A simple standard for mapping metadata and a simple table format have been instrumental for collaborating with groups such as OpenTargets, IMPC , MGI and the Center for Cancer Data Harmonization [CCDH ] to build better mapping sets, for example by sharing and editing mapping sets directly through Google Sheets. Developing a metadata standard is ...
  2. pubmed.ncbi.nlm.nih.gov

    A Simple Standard for Sharing Ontological Mappings (SSSOM) Database (Oxford). 2022 May 25;2022:baac035. doi: 10.1093/database/baac035. ... We have developed the Simple Standard for Sharing Ontological Mappings (SSSOM) which addresses these problems by: (i) Introducing a machine-readable and extensible vocabulary to describe metadata that makes ...
  3. mapping-commons.github.io

    The Simple Standard for Sharing Ontological Mappings (SSSOM) is a community-driven standard designed to facilitate the exchange and integration of semantic entity mappings. As data interoperability becomes increasingly crucial across various domains, SSSOM provides a standardized format to share mappings, enabling researchers and developers to ...
  4. mapping-commons.github.io

    This document is the official specification for the SSSOM standard. It is divided in two sections covering the two different components of the standard: the specification for the data model, to manipulate SSSOM mappings and mapping sets in your programs; the specification for the serialisation formats, to read, write, and exchange SSSOM mapping ...
  5. mapping-commons.github.io

    Introduction to mapping curation with SSSOM. Mappings between entities from ontologies, terminologies and databases are created for many reasons (data integration, knowledge graphs) and maintained in many different ways (automated matching, manual curation). In the following tutorial, we will learn how to curate semantic mappings manually using ...
  6. The Simple Standard for Sharing Ontological Mappings (SSSOM) addresses these problems by: 1. Introducing a machine-readable and extensible vocabulary to describe metadata that makes imprecision, inaccuracy and incompleteness in mappings explicit. 2. Defining an easy to use table-based format that can be integrated into existing
  7. Additionally, there should be a simple tabular form to enable easy exploration, management, viewing and processing by computational and human users, without needing specialized editing tools. Our solution. In this paper, we present SSSOM, a Simple Standard for Sharing Ontological Mappings (pronounced "sessom" or S.S.S.O.M). SSSOM's goals ...
  8. A Simple Standard for Sharing Ontological Mappings (SSSOM) Nicolas Matentzoglu, James P. Balhoff , Susan M. Bello , Chris Bizon , Matthew Brush, 2 3 2 Tiffany J. Callahan4, Christopher G Chute 5, William D. Duncan 6, Chris T. Evelo 7, Davera Gabriel 5, John Graybeal 8, Alasdair Gray 9, Benjamin M. Gyori 10, Melissa Haendel 4, Henriette Harmse
  9. Abstract Despite progress in the development of standards for describing and exchanging scientific information, the lack of easy-to-use standards for mapping between different representations of the same or similar objects in different databases poses a major impediment to data integration and interoperability. Mappings often lack the metadata needed to be correctly interpreted and applied.
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