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Showing results excluding:
  • pubmed.ncbi.nlm.nih.gov

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  1. academic.oup.com

    A simple standard for mapping metadata and a simple table format have been instrumental for collaborating with groups such as OpenTargets, IMPC , MGI and the Center for Cancer Data Harmonization [CCDH ] to build better mapping sets, for example by sharing and editing mapping sets directly through Google Sheets. Developing a metadata standard is ...
  2. SSSOM is a Simple Standard for Sharing Ontological Mappings, providing. a TSV-based representation for ontology term mappings; a comprehensive set of standard metadata elements to describe mappings and; a standard translation between the TSV and the Web Ontology Language (OWL).
  3. mapping-commons.github.io

    The Simple Standard for Sharing Ontology Mappings (SSSOM) addresses these problems by defining a catalog of metadata terms to describe mappings. Both individual mappings and sets of mappings can be described, enabling provenance and metadata to be captured on multiple levels. SSSOM interoperates with existing methods for the specification of ...
  4. mapping-commons.github.io

    The Simple Standard for Sharing Ontological Mappings (SSSOM) is a community-driven standard designed to facilitate the exchange and integration of semantic entity mappings. As data interoperability becomes increasingly crucial across various domains, SSSOM provides a standardized format to share mappings, enabling researchers and developers to ...
  5. In this section we describe the SSSOM standard in four subsections: The core data model and the metadata elements included in SSSOM How SSSOM is exchanged, including the canonical simple tabular serialization Governance and sustainability of the standard The emerging software ecosystem for working with SSSOM mappings
  6. mapping-commons.github.io

    This document is the official specification for the SSSOM standard. It is divided in two sections covering the two different components of the standard: the specification for the data model, to manipulate SSSOM mappings and mapping sets in your programs; the specification for the serialisation formats, to read, write, and exchange SSSOM mapping ...
  7. openaccess.city.ac.uk

    We have developed the Simple Standard for Sharing Ontological Mappings (SSSOM) which addresses these problems by: (i) Introducing a machine-readable and extensible vocabulary to describe metadata that makes imprecision, inaccuracy and incompleteness in mappings explicit.
  8. Abstract Despite progress in the development of standards for describing and exchanging scientific information, the lack of easy-to-use standards for mapping between different representations of the same or similar objects in different databases poses a major impediment to data integration and interoperability. Mappings often lack the metadata needed to be correctly interpreted and applied.
  9. researchgate.net

    We have developed the Simple Standard for Sharing Ontological Mappings (SSSOM) which addresses these problems by: (i) Introducing a machine-readable and extensible vocabulary to describe metadata ...
  10. A Simple Standard for Sharing Ontological Mappings (SSSOM) Nicolas Matentzoglu, James P. Balhoff , Susan M. Bello , Chris Bizon , Matthew Brush, 2 3 2 Tiffany J. Callahan4, Christopher G Chute 5, William D. Duncan 6, Chris T. Evelo 7, Davera Gabriel 5, John Graybeal 8, Alasdair Gray 9, Benjamin M. Gyori 10, Melissa Haendel 4, Henriette Harmse
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