mapping-commons.github.io
mapping-commons.github.io
https://mapping-commons.github.io › sssom
Basic Tutorial
A Simple Standard for Sharing Ontology Mappings (SSSOM) Basic Tutorial Initializing search GitHub A Simple Standard for Sharing Ontology Mappings (SSSOM) ... As FOODON is an ontology, having a mapping to a more specific element (e.g. gala) may help us to find an appropriate mapping for the more general concept ...
Introduction
The Simple Standard for Sharing Ontology Mappings (SSSOM) addresses these problems by defining a catalog of metadata terms to describe mappings. Both individual mappings and sets of mappings can be described, enabling provenance and metadata to be captured on multiple levels. SSSOM interoperates with existing methods for the specification of ...
Resources for contributors
A Simple Standard for Sharing Ontology Mappings (SSSOM) Resources for contributors Initializing search GitHub A Simple Standard for Sharing Ontology Mappings (SSSOM) ... How to use mapping predicates Set up a mapping registry/commons A basic guide for the SSSOM toolkit 5-Star Entity Mappings - Cheatsheet Matching tool implementation guide ...
Related documentation
Related documentation Related documentation. SSSOM Toolkit: A toolkit and library for processing SSSOM files in Python; SSSOM Java: A toolkit and library for processing SSSOM files in Java; Semantic Mapping Vocabulary (SEMAPV): The mapping vocabulary used for mapping justifications and specialised mapping predicates LinkML: The modelling framework used by SSSOM
Funding
The Simple Standard for Sharing Ontological Mappings (SSSOM) is a community-driven project which has received support from many different sources. We list the most important ones in the following. Volunteering efforts. A huge fraction of the work on SSSOM has been done by volunteers without dedicated grant support.
FAQ
The idea of a mapping commons is to provide mappings in a decentralised fashion akin to OBO ontologies. A mapping commons collects mappings relevant to a particular community, either by reference (i.e. pulling in mapping sets already published elsewhere), or directly maintained at the mapping commons .